Proteomics: Publications

  1. St Clair, R. M., Dumas, C. M., Williams, K. S., Goldstein, M. T., Stant, E. A., Ebert, A. M., and Ballif, B. A. (2019) PKC induces release of a functional ectodomain of the guidance cue semaphorin6A. FEBS letters 
  2. Scuderi, R. A., Ebenstein, D. B., Lam, Y. W., Kraft, J., and Greenwood, S. L. (2019) Inclusion of grape marc in dairy cattle rations alters the bovine milk proteome. J Dairy Res 86, 154-161
  3. Schwartzman, J. A., Lynch, J. B., Flores Ramos, S., Zhou, L., Apicella, M. A., Yew, J. Y., and Ruby, E. G. (2019) Acidic pH promotes lipopolysaccharide modification and alters colonization in a bacteria-animal mutualism. Mol Microbiol 
  4. Mikheyeva, I. V., Thomas, J. M., Kolar, S. L., Corvaglia, A. R., Gaiotaa, N., Leo, S., Francois, P., Liu, G. Y., Rawat, M., and Cheung, A. L. (2019) YpdA, a putative bacillithiol disulfide reductase, contributes to cellular redox homeostasis and virulence in Staphylococcus aureus. Mol Microbiol 111, 1039-1056
  5. Lynch, J. B., Schwartzman, J. A., Bennett, B. D., McAnulty, S. J., Knop, M., Nyholm, S. V., and Ruby, E. G. (2019) Ambient pH alters protein content of outer membrane vesicles, driving host development in a beneficial symbiosis. Journal of bacteriology 
  6. Keller, J. I., Lima-Cordon, R., Monroy, M. C., Schmoker, A. M., Zhang, F., Howard, A., Ballif, B. A., and Stevens, L. (2019) Protein mass spectrometry detects multiple bloodmeals for enhanced Chagas disease vector ecology. Infect Genet Evol 74, 103998
  7. Corigliano, M. G., Albarracin, R. M., Vilas, J. M., Sanchez Lopez, E. F., Bengoa Luoni, S. A., Deng, B., Farran, I., Veramendi, J., Maiale, S. J., Sander, V. A., and Clemente, M. (2019) Heat treatment alleviates the growth and photosynthetic impairment of transplastomic plants expressing Leishmania infantum Hsp83-Toxoplasma gondii SAG1 fusion protein. Plant Sci 284, 117-126
  8. Wrenn, S. M., Griswold, E. D., Uhl, F. E., Uriarte, J. J., Park, H. E., Coffey, A. L., Dearborn, J. S., Ahlers, B. A., Deng, B., Lam, Y. W., Huston, D. R., Lee, P. C., Wagner, D. E., and Weiss, D. J. (2018) Avian lungs: A novel scaffold for lung bioengineering. PloS one 13, e0198956
  9. Wood, M., Rymarchyk, S., Zheng, S., and Cen, Y. (2018) Trichostatin A inhibits deacetylation of histone H3 and p53 by SIRT6. Archives of biochemistry and biophysics 638, 8-17
  10. van der Velden, J. L., Wagner, D. E., Lahue, K. G., Abdalla, S. T., Lam, Y. W., Weiss, D. J., and Janssen-Heininger, Y. M. W. (2018) TGF-beta1-induced deposition of provisional extracellular matrix by tracheal basal cells promotes epithelial-to-mesenchymal transition in a JNK1-dependent manner. American journal of physiology. Lung cellular and molecular physiology 
  11. Sladewski, T. E., Billington, N., Ali, M. Y., Bookwalter, C. S., Lu, H., Krementsova, E. B., Schroer, T. A., and Trybus, K. M. (2018) Recruitment of two dyneins to an mRNA-dependent Bicaudal D transport complex. eLife 7
  12. Sheehe, J. L., Bonev, A. D., Schmoker, A. M., Ballif, B. A., Nelson, M. T., Moon, T. M., and Dostmann, W. R. (2018) Oxidation of cysteine 117 stimulates constitutive activation of the type Ialpha cGMP-dependent protein kinase. The Journal of biological chemistry 293, 16791-16802
  13. Schmoker, A. M., Barritt, S. A., Weir, M. E., Mann, J. E., Hogan, T. C., Ballif, B. A., and Deming, P. B. (2018) Fyn Regulates Binding Partners of Cyclic-AMP Dependent Protein Kinase A. Proteomes 6
  14. Peng, M., Cong, K., Panzarino, N. J., Nayak, S., Calvo, J., Deng, B., Zhu, L. J., Morocz, M., Hegedus, L., Haracska, L., and Cantor, S. B. (2018) Opposing Roles of FANCJ and HLTF Protect Forks and Restrain Replication during Stress. Cell reports 24, 3251-3261
  15. Munson, P., Lam, Y. W., MacPherson, M., Beuschel, S., and Shukla, A. (2018) Mouse serum exosomal proteomic signature in response to asbestos exposure. Journal of cellular biochemistry 119, 6266-6273
  16. Munson, P., Lam, Y. W., Dragon, J., MacPherson, M., and Shukla, A. (2018) Exosomes from asbestos-exposed cells modulate gene expression in mesothelial cells. FASEB journal : official publication of the Federation of American Societies for Experimental Biology, fj201701291RR
  17. Keller, J. I., Schmidt, J. O., Schmoker, A. M., Ballif, B. A., and Stevens, L. (2018) Protein mass spectrometry extends temporal blood meal detection over polymerase chain reaction in mouse-fed Chagas disease vectors. Memorias do Instituto Oswaldo Cruz 113, e180160
  18. Heppner, D. E., Dustin, C. M., Liao, C., Hristova, M., Veith, C., Little, A. C., Ahlers, B. A., White, S. L., Deng, B., Lam, Y. W., Li, J., and van der Vliet, A. (2018) Direct cysteine sulfenylation drives activation of the Src kinase. Nature communications 9, 4522
  19. Graham, E., Rymarchyk, S., Wood, M., and Cen, Y. (2018) Development of Activity-Based Chemical Probes for Human Sirtuins. ACS chemical biology 13, 782-792
  20. Burgess, E. J., Hoyt, L. R., Randall, M. J., Mank, M. M., Bivona, J. J., 3rd, Eisenhauer, P. L., Botten, J. W., Ballif, B. A., Lam, Y. W., Wargo, M. J., Boyson, J. E., Ather, J. L., and Poynter, M. E. (2018) Bacterial Lipoproteins Constitute the TLR2-Stimulating Activity of Serum Amyloid A. Journal of immunology 
  21. Bontemps-Gallo, S., Gaviard, C., Richards, C. L., Kentache, T., Raffel, S. J., Lawrence, K. A., Schindler, J. C., Lovelace, J., Dulebohn, D. P., Cluss, R. G., Hardouin, J., and Gherardini, F. C. (2018) Global Profiling of Lysine Acetylation in Borrelia burgdorferi B31 Reveals Its Role in Central Metabolism. Frontiers in microbiology 9, 2036
  22. Ziegler, C. M., Eisenhauer, P., Kelly, J. A., Dang, L. N., Beganovic, V., Bruce, E. A., King, B. R., Shirley, D. J., Weir, M. E., Ballif, B. A., and Botten, J. (2017) A proteomic survey of Junin virus interactions with human proteins reveals host factors required for arenavirus replication. Journal of virology 
  23. Uhl, F. E., Wagner, D. E., and Weiss, D. J. (2017) Preparation of Decellularized Lung Matrices for Cell Culture and Protein Analysis. Methods in molecular biology 1627, 253-283
  24. Toomey, C. G., Weiss, D., Chant, A., Ackerman, M., Ahlers, B. A., Lam, Y.-W., Ricciardi, C., Bourne, D., and Kraemer-Chant, C. M. (2017) Development and Applications of a Calmodulin-Based Fusion Protein System for the Expression and Purification of WW and Zinc Finger Modules. Advances in Biological Chemistry 07, 89-106
  25. Thammahong, A., Caffrey-Card, A. K., Dhingra, S., Obar, J. J., and Cramer, R. A. (2017) Aspergillus fumigatus Trehalose-Regulatory Subunit Homolog Moonlights To Mediate Cell Wall Homeostasis through Modulation of Chitin Synthase Activity. mBio 8
  26. Tacoma, R., Gelsinger, S. L., Lam, Y. W., Scuderi, R. A., Ebenstein, D. B., Heinrichs, A. J., and Greenwood, S. L. (2017) Exploration of the bovine colostrum proteome and effects of heat treatment time on colostrum protein profile. Journal of dairy science 100, 9392-9401
  27. Tacoma, R., Fields, J., Ebenstein, D. B., Lam, Y. W., and Greenwood, S. L. (2017) Ratio of dietary rumen degradable protein to rumen undegradable protein affects nitrogen partitioning but does not affect the bovine milk proteome produced by mid-lactation Holstein dairy cows. Journal of dairy science 100, 7246-7261
  28. St Clair, R. M., Emerson, S. E., D’Elia, K. P., Weir, M. E., Schmoker, A. M., Ebert, A. M., and Ballif, B. A. (2017) Fyn-dependent phosphorylation of PlexinA1 and PlexinA2 at conserved tyrosines is essential for zebrafish eye development. The FEBS journal 
  29. Schmoker, A. M., Weinert, J. L., Kellett, K. J., Johnson, H. E., Joy, R. M., Weir, M. E., Ebert, A. M., and Ballif, B. A. (2017) Dynamic multi-site phosphorylation by Fyn and Abl drives the interaction between CRKL and the novel scaffolding receptors DCBLD1 and DCBLD2. The Biochemical journal 
  30. Prakash, A., Moharana, K., Wallace, S. S., and Doublie, S. (2017) Destabilization of the PCNA trimer mediated by its interaction with the NEIL1 DNA glycosylase. Nucleic acids research 45, 2897-2909
  31. Pollard, L. W., Bookwalter, C. S., Tang, Q., Krementsova, E. B., Trybus, K. M., and Lowey, S. (2017) Fission yeast myosin Myo2 is down-regulated in actin affinity by light chain phosphorylation. Proceedings of the National Academy of Sciences of the United States of America 114, E7236-E7244
  32. Northrop, A. C., Brooks, R., Ellison, A. M., Gotelli, N. J., and Ballif, B. A. (2017) Environmental proteomics reveals taxonomic and functional changes in an enriched aquatic ecosystem. Ecosphere 8
  33. Liu, Y., Wang, B. X., Li, J., Song, Z. Q., Lu, B. G., Chi, M., Yang, B., Liu, J. B., Lam, Y. W., Li, J. X., and Xu, D. Y. (2017) Salt-response analysis in two rice cultivars at seedling stage. Acta Physiol Plant 39
  34. Li, S., Diego-Limpin, P. A., Bajrami, B., Keshipeddy, S., Lam, Y. W., Deng, B., Farrokhi, V., McShane, A. J., Nemati, R., Howell, A. R., and Yao, X. (2017) Scaling Proteome-Wide Reactions of Activity-Based Probes. Analytical chemistry 89, 6295-6299
  35. Lee, C. W., Stankowski, J. N., Chew, J., Cook, C. N., Lam, Y. W., Almeida, S., Carlomagno, Y., Lau, K. F., Prudencio, M., Gao, F. B., Bogyo, M., Dickson, D. W., and Petrucelli, L. (2017) The lysosomal protein cathepsin L is a progranulin protease. Molecular neurodegeneration 12, 55
  36. King, B. R., Hershkowitz, D., Eisenhauer, P. L., Weir, M. E., Ziegler, C. M., Russo, J., Bruce, E. A., Ballif, B. A., and Botten, J. (2017) A Map of the Arenavirus Nucleoprotein-Host Protein Interactome Reveals that Junin Virus Selectively Impairs the Antiviral Activity of Double-Stranded RNA-Activated Protein Kinase (PKR). Journal of virology 91
  37. Keller, J. I., Ballif, B. A., St Clair, R. M., Vincent, J. J., Monroy, M. C., and Stevens, L. (2017) Chagas disease vector blood meal sources identified by protein mass spectrometry. PloS one 12, e0189647
  38. Corwin, T., Woodsmith, J., Apelt, F., Fontaine, J. F., Meierhofer, D., Helmuth, J., Grossmann, A., Andrade-Navarro, M. A., Ballif, B. A., and Stelzl, U. (2017) Defining Human Tyrosine Kinase Phosphorylation Networks Using Yeast as an In Vivo Model Substrate. Cell systems 5, 128-139 e124
  39. Clemments, A. M., Botella, P., and Landry, C. C. (2017) Spatial Mapping of Protein Adsorption on Mesoporous Silica Nanoparticles by Stochastic Optical Reconstruction Microscopy. Journal of the American Chemical Society 139, 3978-3981
  40. Ziegler, C. M., Eisenhauer, P., Bruce, E. A., Weir, M. E., King, B. R., Klaus, J. P., Krementsov, D. N., Shirley, D. J., Ballif, B. A., and Botten, J. (2016) The Lymphocytic Choriomeningitis Virus Matrix Protein PPXY Late Domain Drives the Production of Defective Interfering Particles. PLoS pathogens 12, e1005501
  41. Ziegler, C. M., Eisenhauer, P., Bruce, E. A., Beganovic, V., King, B. R., Weir, M. E., Ballif, B. A., and Botten, J. (2016) A novel phosphoserine motif in the LCMV matrix protein Z regulates the release of infectious virus and defective interfering particles. The Journal of general virology 97, 2084-2089
  42. Weir, M. E., Mann, J. E., Corwin, T., Fulton, Z. W., Hao, J. M., Maniscalco, J. F., Kenney, M. C., Roman Roque, K. M., Chapdelaine, E. F., Stelzl, U., Deming, P. B., Ballif, B. A., and Hinkle, K. L. (2016) Novel autophosphorylation sites of Src family kinases regulate kinase activity and SH2 domain-binding capacity. FEBS letters 590, 1042-1052
  43. Tang, Q., Billington, N., Krementsova, E. B., Bookwalter, C. S., Lord, M., and Trybus, K. M. (2016) A single-headed fission yeast myosin V transports actin in a tropomyosin-dependent manner. The Journal of cell biology 214, 167-179
  44. Tacoma, R., Fields, J., Ebenstein, D. B., Lam, Y. W., and Greenwood, S. L. (2016) Comparative proteomics dataset of skimmed milk samples from Holstein and Jersey dairy cattle. Data in brief 6, 843-846
  45. Prakash, A., Cao, V. B., and Doublie, S. (2016) Phosphorylation Sites Identified in the NEIL1 DNA Glycosylase Are Potential Targets for the JNK1 Kinase. PloS one 11, e0157860
  46. Platz, J., Bonenfant, N. R., Uhl, F. E., Coffey, A. L., McKnight, T., Parsons, C., Sokocevic, D., Borg, Z. D., Lam, Y. W., Deng, B., Fields, J. G., DeSarno, M., Loi, R., Hoffman, A. M., Bianchi, J., Dacken, B., Petersen, T., Wagner, D. E., and Weiss, D. J. (2016) Comparative Decellularization and Recellularization of Wild-Type and Alpha 1,3 Galactosyltransferase Knockout Pig Lungs: A Model for Ex Vivo Xenogeneic Lung Bioengineering and Transplantation. Tissue engineering. Part C, Methods 22, 725-739
  47. Lemas, D., Lekkas, P., Ballif, B. A., and Vigoreaux, J. O. (2016) Intrinsic disorder and multiple phosphorylations constrain the evolution of the flightin N-terminal region. Journal of proteomics 135, 191-200
  48. Krishnamurthy, S., Deng, B., Del Rio, R., Buchholz, K. R., Treeck, M., Urban, S., Boothroyd, J., Lam, Y. W., and Ward, G. E. (2016) Not a Simple Tether: Binding of Toxoplasma gondii AMA1 to RON2 during Invasion Protects AMA1 from Rhomboid-Mediated Cleavage and Leads to Dephosphorylation of Its Cytosolic Tail. mBio 7
  49. Cheerathodi, M., Avci, N. G., Guerrero, P. A., Tang, L. K., Popp, J., Morales, J. E., Chen, Z., Carnero, A., Lang, F. F., Ballif, B. A., Rivera, G. M., and McCarty, J. H. (2016) The Cytoskeletal Adapter Protein Spinophilin Regulates Invadopodia Dynamics and Tumor Cell Invasion in Glioblastoma. Molecular cancer research : MCR 14, 1277-1287
  50. Caballero, M. C., Alonso, A. M., Deng, B., Attias, M., de Souza, W., and Corvi, M. M. (2016) Identification of new palmitoylated proteins in Toxoplasma gondii. Biochimica et biophysica acta 1864, 400-408
  51. Yano, J., Valentine, M. S., and Van Houten, J. L. (2015) Novel Insights into the Development and Function of Cilia Using the Advantages of the Paramecium Cell and Its Many Cilia. Cells 4, 297-314
  52. Xie, Y., Jin, Y., Merenick, B. L., Ding, M., Fetalvero, K. M., Wagner, R. J., Mai, A., Gleim, S., Tucker, D. F., Birnbaum, M. J., Ballif, B. A., Luciano, A. K., Sessa, W. C., Rzucidlo, E. M., Powell, R. J., Hou, L., Zhao, H., Hwa, J., Yu, J., and Martin, K. A. (2015) Phosphorylation of GATA-6 is required for vascular smooth muscle cell differentiation after mTORC1 inhibition. Science signaling 8, ra44
  53. Woodward, M., Previs, M. J., Mader, T. J., and Debold, E. P. (2015) Modifications of myofilament protein phosphorylation and function in response to cardiac arrest induced in a swine model. Frontiers in physiology 6, 199
  54. Tacoma, R., Fields, J., Ebenstein, D. B., Lam, Y. W., and Greenwood, S. L. (2015) Characterization of the bovine milk proteome in early-lactation Holstein and jersey breeds of dairy cows. Journal of proteomics 
  55. Smith, K. P., Fields, J. G., Voogt, R. D., Deng, B., Lam, Y. W., and Mintz, K. P. (2015) Alteration in abundance of specific membrane proteins of Aggregatibacter actinomycetemcomitans is attributed to deletion of the inner membrane protein MorC. Proteomics 
  56. Schmidts, M., Hou, Y., Cortes, C. R., Mans, D. A., Huber, C., Boldt, K., Patel, M., van Reeuwijk, J., Plaza, J. M., van Beersum, S. E., Yap, Z. M., Letteboer, S. J., Taylor, S. P., Herridge, W., Johnson, C. A., Scambler, P. J., Ueffing, M., Kayserili, H., Krakow, D., King, S. M., Uk10K, Beales, P. L., Al-Gazali, L., Wicking, C., Cormier-Daire, V., Roepman, R., Mitchison, H. M., and Witman, G. B. (2015) TCTEX1D2 mutations underlie Jeune asphyxiating thoracic dystrophy with impaired retrograde intraflagellar transport. Nature communications 6, 7074
  57. Perlini, L. E., Szczurkowska, J., Ballif, B. A., Piccini, A., Sacchetti, S., Giovedi, S., Benfenati, F., and Cancedda, L. (2015) Synapsin III acts downstream of semaphorin 3A/CDK5 signaling to regulate radial migration and orientation of pyramidal neurons in vivo. Cell reports 11, 234-248
  58. Flemer, S., Jr. (2015) Fmoc-Sec(Xan)-OH: synthesis and utility of Fmoc selenocysteine SPPS derivatives with acid-labile sidechain protection. Journal of peptide science : an official publication of the European Peptide Society 21, 53-59
  59. Daniels, G., Ballif, B. A., Helias, V., Saison, C., Grimsley, S., Mannessier, L., Hustinx, H., Lee, E., Cartron, J. P., Peyrard, T., and Arnaud, L. (2015) Lack of the nucleoside transporter ENT1 results in the Augustine-null blood type and ectopic mineralization. Blood 125, 3651-3654
  60. Cunniff, B., Newick, K., Nelson, K. J., Wozniak, A. N., Beuschel, S., Leavitt, B., Bhave, A., Butnor, K., Koenig, A., Chouchani, E. T., James, A. M., Haynes, A. C., Lowther, W. T., Murphy, M. P., Shukla, A., and Heintz, N. H. (2015) Disabling Mitochondrial Peroxide Metabolism via Combinatorial Targeting of Peroxiredoxin 3 as an Effective Therapeutic Approach for Malignant Mesothelioma. PloS one 10, e0127310
  61. Clemments, A. M., Botella, P., and Landry, C. C. (2015) Protein Adsorption From Biofluids on Silica Nanoparticles: Corona Analysis as a Function of Particle Diameter and Porosity. ACS applied materials & interfaces 7, 21682-21689
  62. Cheerathodi, M., Vincent, J. J., and Ballif, B. A. (2015) Quantitative comparison of CrkL-SH3 binding proteins from embryonic murine brain and liver: Implications for developmental signaling and the quantification of protein species variants in bottom-up proteomics. Journal of proteomics 125, 104-111
  63. Awata, J., Song, K., Lin, J., King, S. M., Sanderson, M. J., Nicastro, D., and Witman, G. B. (2015) DRC3 connects the N-DRC to dynein g to regulate flagellar waveform. Molecular biology of the cell 26, 2788-2800
  64. Arnaud, L., Kelley, L. P., Helias, V., Cartron, J. P., and Ballif, B. A. (2015) SMIM1 is a type II transmembrane phosphoprotein and displays the Vel blood group antigen at its carboxyl-terminus. FEBS letters 589, 3624-3630
  65. Wagner, D. E., Bonenfant, N. R., Sokocevic, D., DeSarno, M. J., Borg, Z. D., Parsons, C. S., Brooks, E. M., Platz, J. J., Khalpey, Z. I., Hoganson, D. M., Deng, B., Lam, Y. W., Oldinski, R. A., Ashikaga, T., and Weiss, D. J. (2014) Three-dimensional scaffolds of acellular human and porcine lungs for high throughput studies of lung disease and regeneration. Biomaterials 35, 2664-2679
  66. Wagner, D. E., Bonenfant, N. R., Parsons, C. S., Sokocevic, D., Brooks, E. M., Borg, Z. D., Lathrop, M. J., Wallis, J. D., Daly, A. B., Lam, Y. W., Deng, B., Desarno, M. J., Ashikaga, T., Loi, R., and Weiss, D. J. (2014) Comparative decellularization and recellularization of normal versus emphysematous human lungs. Biomaterials 35, 3281-3297
  67. Tang, Q., Andenmatten, N., Triana, M. A., Deng, B., Meissner, M., Moreno, S. N., Ballif, B. A., and Ward, G. E. (2014) Calcium-dependent phosphorylation alters Class XIVa myosin function in the protozoan parasite Toxoplasma gondii. Molecular biology of the cell 
  68. Smith, K. P., Fields, J. G., Voogt, R. D., Deng, B., Lam, Y. W., and Mintz, K. P. (2014) The cell envelope proteome of Aggregatibacter actinomycetemcomitans. Molecular oral microbiology 
  69. Rizzo, A. A., Suhanovsky, M. M., Baker, M. L., Fraser, L. C., Jones, L. M., Rempel, D. L., Gross, M. L., Chiu, W., Alexandrescu, A. T., and Teschke, C. M. (2014) Multiple Functional Roles of the Accessory I-Domain of Bacteriophage P22 Coat Protein Revealed by NMR Structure and CryoEM Modeling. Structure 22, 830-841
  70. Picariello, T., Valentine, M. S., Yano, J., and Van Houten, J. (2014) Reduction of meckelin leads to general loss of cilia, ciliary microtubule misalignment and distorted cell surface organization. Cilia 3, 2
  71. Miller, R. W., Duncan, A. K., Schneebeli, S. T., Gray, D. L., and Whalley, A. C. (2014) Synthesis and structural data of tetrabenzo[8]circulene. Chemistry 20, 3705-3711
  72. Machamer, N. K., Liu, X., and Waters, S. P. (2014) A new entry to azomethine ylides from allylic amines and glyoxals: shifting the reliance on amino ester precursors. Organic letters 16, 4996-4999
  73. Lopez-Camacho, C., van Wijnen, A. J., Lian, J. B., Stein, J. L., and Stein, G. S. (2014) Core Binding Factor beta (CBFbeta) Is Retained in the Midbody During Cytokinesis. Journal of cellular physiology 229, 1466-1474
  74. Leung, J. M., Tran, F., Pathak, R. B., Poupart, S., Heaslip, A. T., Ballif, B. A., Westwood, N. J., and Ward, G. E. (2014) Identification of T. gondii Myosin Light Chain-1 as a Direct Target of TachypleginA-2, a Small-Molecule Inhibitor of Parasite Motility and Invasion. PloS one 9, e98056
  75. Jabre, N. D., Watanabe, T., and Brewer, M. (2014) Formal and total synthesis of (+/-)-cycloclavine. Tetrahedron letters 56, 197-199
  76. Hristova, M., Veith, C., Habibovic, A., Lam, Y. W., Deng, B., Geiszt, M., Janssen-Heininger, Y. M., and van der Vliet, A. (2014) Identification of DUOX1-dependent redox signaling through protein S-glutathionylation in airway epithelial cells. Redox biology 2, 436-446
  77. Galan, J. A., Geraghty, K. M., Lavoie, G., Kanshin, E., Tcherkezian, J., Calabrese, V., Jeschke, G. R., Turk, B. E., Ballif, B. A., Blenis, J., Thibault, P., and Roux, P. P. (2014) Phosphoproteomic analysis identifies the tumor suppressor PDCD4 as a RSK substrate negatively regulated by 14-3-3. Proceedings of the National Academy of Sciences of the United States of America 111, E2918-2927
  78. Doubleday, P. F., and Ballif, B. A. (2014) Developmentally-Dynamic Murine Brain Proteomes and Phosphoproteomes Revealed by Quantitative Proteomics. Proteomes 2, 197-207
  79. Deng, L., Kabeche, R., Wang, N., Wu, J. Q., and Moseley, J. B. (2014) Megadalton-node assembly by binding of Skb1 to the membrane anchor Slf1. Molecular biology of the cell 25, 2660-2668
  80. Cherian, S., Wai Lam, Y., McDaniels, I., Struziak, M., and Delay, R. J. (2014) Estradiol rapidly modulates odor responses in mouse vomeronasal sensory neurons. Neuroscience 269, 43-58
  81. Bayir, A., and Brewer, M. (2014) Fragmentation of bicyclic gamma-silyloxy-beta-hydroxy-alpha-diazolactones as an approach to ynolides. The Journal of organic chemistry 79, 6037-6046
  82. Ballok, A. E., Filkins, L. M., Bomberger, J. M., Stanton, B. A., and O’Toole, G. A. (2014) Epoxide-mediated differential packaging of Cif and other virulence factors into outer membrane vesicles. Journal of bacteriology 196, 3633-3642
  83. Awata, J., Takada, S., Standley, C., Lechtreck, K. F., Bellve, K. D., Pazour, G. J., Fogarty, K. E., and Witman, G. B. (2014) NPHP4 controls ciliary trafficking of membrane proteins and large soluble proteins at the transition zone. Journal of cell science 127, 4714-4727
  84. Angel, S. O., Figueras, M. J., Alomar, M. L., Echeverria, P. C., and Deng, B. (2014) Toxoplasma gondii Hsp90: potential roles in essential cellular processes of the parasite. Parasitology, 1-10
  85. Alayev, A., Doubleday, P. F., Berger, S. M., Ballif, B. A., and Holz, M. K. (2014) Phosphoproteomics reveals resveratrol-dependent inhibition of Akt/mTORC1/S6K1 signaling. Journal of proteome research 13, 5734-5742
  86. Zhang, Z., Giampa, G. M., Draghici, C., Huang, Q., and Brewer, M. (2013) Synthesis of demissidine by a ring fragmentation 1,3-dipolar cycloaddition approach. Organic letters 15, 2100-2103
  87. Yano, J., Rajendran, A., Valentine, M. S., Saha, M., Ballif, B. A., and Van Houten, J. L. (2013) Proteomic analysis of the cilia membrane of Paramecium tetraurelia. Journal of proteomics 78, 113-122
  88. Torde, R. G., Therrien, A. J., Shortreed, M. R., Smith, L. M., and Lamos, S. M. (2013) Multiplexed analysis of cage and cage free chicken egg fatty acids using stable isotope labeling and mass spectrometry. Molecules 18, 14977-14988
  89. Syed, K., Porollo, A., Lam, Y. W., Grimmett, P. E., and Yadav, J. S. (2013) A catalytically versatile fungal P450 monooxygenase (CYP63A2) capable of oxidizing higher polycyclic aromatic hydrocarbons, alkylphenols, and alkanes. Applied and environmental microbiology 
  90. Suhanovsky, M. M., and Teschke, C. M. (2013) An intramolecular chaperone inserted in bacteriophage P22 coat protein mediates its chaperonin-independent folding. The Journal of biological chemistry 288, 33772-33783
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