VBRN Publications

Publications that cite VBRN. Publications listed are from PubMedCentral, sorted by publication date. Click on any publication to read. (Links open in new tab.)

1.) Elko EA, Manuel AM, White S, Zito E, van der Vliet A, Anathy V, Janssen-Heininger YM (2021 Apr 23). Oxidation of peroxiredoxin-4 induces oligomerization and promotes interaction with proteins governing protein folding and endoplasmic reticulum stress. The Journal of Biological Chemistry, 296(0), 100665. doi:10.1016/j.jbc.2021.100665. PMC8141880

2.) KIERNAN LC, OLSEN DM (2020 Jul). Improving clinical competency using simulation technology. Nursing, 50(7), 14-19. doi:10.1097/01.NURSE.0000668448.43535.4f. PMC8130000

3.) Aboushousha R, Elko E, Chia SB, Manuel AM, van de Wetering C, van der Velden J, MacPherson M, Erickson C, Reisz JA, D’Alessandro A, Wouters EF, Reynaert NL, Lam YW, Anathy V, van der Vliet A, Seward DJ, Janssen-Heininger YM (2021 May). Glutathionylation chemistry promotes interleukin-1 beta-mediated glycolytic reprogramming and pro-inflammatory signaling in lung epithelial cells. FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 35(5), e21525. doi:10.1096/fj.202002687RR. PMC8073242

4.) Giddings LA, Lountos GT, Kim KW, Brockley M, Needle D, Cherry S, Tropea JE, Waugh DS (2021 Mar 30). Characterization of a broadly specific cadaverine N-hydroxylase involved in desferrioxamine B biosynthesis in Streptomyces sviceus. PLoS ONE, 16(3), e0248385. doi:10.1371/journal.pone.0248385. PMC8009421

5.) Fairfield H, Costa S, Falank C, Farrell M, Murphy CS, D’Amico A, Driscoll H, Reagan MR (2021 Feb 18). Multiple Myeloma Cells Alter Adipogenesis, Increase Senescence-Related and Inflammatory Gene Transcript Expression, and Alter Metabolism in Preadipocytes. Frontiers in Oncology, 10(3), 584683. doi:10.3389/fonc.2020.584683. PMC7930573

6.) Minicucci J, Alfond M, Demuro A, Gerberry D, Latulippe J (2021 Jan 28). Quantifying the dose-dependent impact of intracellular amyloid beta in a mathematical model of calcium regulation in xenopus oocyte. PLoS ONE, 16(1), e0246116. doi:10.1371/journal.pone.0246116. PMC7842920

7.) Curry AM, Barton E, Kang W, Mongeluzi DV, Cen Y (2020 Dec 22). Development of Second Generation Activity-Based Chemical Probes for Sirtuins. Molecules, 26(1), 11. doi:10.3390/molecules26010011. PMC7792806

8.) Zhang F, Deng CK, Wang M, Deng B, Barber R, Huang G (2020 Dec 3). Identification of novel alternative splicing biomarkers for breast cancer with LC/MS/MS and RNA-Seq. BMC Bioinformatics, 21(Suppl 9), 541. doi:10.1186/s12859-020-03824-8. PMC7713335

9.) Schmoker AM, Weinert JL, Markwood JM, Albretsen KS, Lunde ML, Weir ME, Ebert AM, Hinkle KL, Ballif BA (2020 Nov 25). FYN and ABL Regulate the Interaction Networks of the DCBLD Receptor Family. Molecular & Cellular Proteomics : MCP, 19(10), 1586-1601. doi:10.1074/mcp.RA120.002163. PMC8015000

10.) Bonney EA, Krebs K, Kim J, Prakash K, Torrance BL, Haynes L, Rincon M (2020 Oct 28). Protective Intranasal Immunization Against Influenza Virus in Infant Mice Is Dependent on IL-6 . Frontiers in Immunology, 11(10), 568978. doi:10.3389/fimmu.2020.568978. PMC7656064

11.) Lloyd JT, McLaughlin K, Lubula MY, Gay JC, Dest A, Gao C, Phillips M, Tonelli M, Cornilescu G, Marunde MR, Evans CM, Boyson SP, Carlson S, Keogh MC, Markley JL, Frietze S, Glass KC (2020 Oct 21). Structural Insights into the Recognition of Mono- and Diacetylated Histones by the ATAD2B Bromodomain. Journal of medicinal chemistry, 63(21), 12799-12813. doi:10.1021/acs.jmedchem.0c01178. PMC7884259

12.) Giddings LA, Chlipala G, Driscoll H, Bhave K, Kunstman K, Green S, Morillo K, Peterson H, Maienschein-Cline M (2020 Sep 8). Seasonal Ely Copper Mine Superfund site shotgun metagenomic and metatranscriptomic data analysis. Data in Brief, 32(21), 106282. doi:10.1016/j.dib.2020.106282. PMC7494679

13.) Giddings LA, Chlipala G, Kunstman K, Green S, Morillo K, Bhave K, Peterson H, Driscoll H, Maienschein-Cline M (2020 Aug 12). Characterization of an acid rock drainage microbiome and transcriptome at the Ely Copper Mine Superfund site. PLoS ONE, 15(8), e0237599. doi:10.1371/journal.pone.0237599. PMC7423320

14.) Moeller RW, Seehuus M, Simonds J, Lorton E, Randle TS, Richter C, Peisch V (2020 Aug 4). The Differential Role of Coping, Physical Activity, and Mindfulness in College Student Adjustment. Frontiers in Psychology, 11(8), 1858. doi:10.3389/fpsyg.2020.01858. PMC7417773

15.) Hasan MM, Teixeira JE, Lam YW, Huston CD (2020 Aug 4). Coactosin Phosphorylation Controls Entamoeba histolytica Cell Membrane Protrusions and Cell Motility. mBio, 11(4), e00660-20. doi:10.1128/mBio.00660-20. PMC7407079

16.) Honan MC, Fahey MJ, Fischer-Tlustos AJ, Steele MA, Greenwood SL (2020 Jul 17). Shifts in the Holstein dairy cow milk fat globule membrane proteome that occur during the first week of lactation are affected by parity. Journal of Animal Science and Biotechnology, 11(4), 81. doi:10.1186/s40104-020-00478-7. PMC7367219

17.) Scuderi RA, Lam YW, Ebenstein DB, Tacoma R, Cersosimo LM, Kraft J, Brito AF, Greenwood SL (2020 May 21). Comparative analysis of the skim milk and milk fat globule membrane proteomes produced by Jersey cows grazing pastures with different plant species diversity. Journal of dairy science, 103(8), 7498-7508. doi:10.3168/jds.2019-17726. PMC7992107

18.) Merenstein C, Ward J, Allen D (2020 May). Diplorickettsia Bacteria in an Ixodes scapularis Tick, Vermont, USA. Emerging Infectious Diseases, 26(5), 1036-1038. doi:10.3201/eid2605.191135. PMC7181933

19.) Moore BM, Ní Chadhain SM, Miller JL, Jones SH, Launen LA (2020 Mar 5). Metagenome Sequences from Tidal Marsh and Marine Sediment from the Great Bay Estuary of New Hampshire. Microbiology Resource Announcements, 9(10), e00038-20. doi:10.1128/MRA.00038-20. PMC7171204

20.) Honan MC, Greenwood SL (2020 Feb 21). Characterization of variations within the rumen metaproteome of Holstein dairy cattle relative to morning feed offering. Scientific Reports, 10(10), 3179. doi:10.1038/s41598-020-59974-5. PMC7035244

21.) Moeller RW, Seehuus M, Peisch V (2020 Jan 31). Emotional Intelligence, Belongingness, and Mental Health in College Students. Frontiers in Psychology, 11(10), 93. doi:10.3389/fpsyg.2020.00093. PMC7006433

22.) Towers E, Morrison-Taylor A, Demar J, Klansky A, Craig K, Haverkamp HC (2020 Jan 27). ACUTE AND DAILY EFFECTS OF REPEATED VOLUNTARY HYPERPNEA ON PULMONARY FUNCTION IN HEALTHY ADULTS. European journal of applied physiology, 120(3), 625-633. doi:10.1007/s00421-020-04302-y. PMC7299177

23.) Nott MA, Driscoll HE, Takeda M, Vangala M, Corsi SR, Tighe SW (2020 Jan 22). Advanced biofilm analysis in streams receiving organic deicer runoff. PLoS ONE, 15(1), e0227567. doi:10.1371/journal.pone.0227567. PMC6975536

24.) Schmoker AM, Perez Pearson LM, Cruz C, Colon Flores LG, Branfeild S, Pagán Torres FD, Fonseca K, Cantres YM, Salgado Ramirez CA, Melendez LM, Ballif BA, Washington AV (2020 Jan 8). Defining the TLT-1 Interactome from Resting and Activated Human Platelets.. Journal of proteomics, 215(1), 103638. doi:10.1016/j.jprot.2020.103638. PMC7044047

25.) Lubkowitz M, Pierce C, Finch T (2020 Winter). A Peer-Mentoring System as a Nontraditional Approach to STEM CUREs. Scholarship and practice of undergraduate research, 4(2), 46-47. doi:10.18833/spur/4/2/4. PMC7943070

26.) Gendron LN, Zites DC, LaRochelle EP, Gunn JR, Pogue BW, Shell TA, Shell JR (2019 Dec 31). Tumor targeting vitamin B12 derivatives for X-ray induced treatment of pancreatic adenocarcinoma. Photodiagnosis and photodynamic therapy, 30(2), 101637. doi:10.1016/j.pdpdt.2019.101637. PMC7505481

27.) Lam YW, Deng B, Hood C (2019 Dec). Vermont Genetics Network Proteomics Facility. Journal of Biomolecular Techniques : JBT, 30(Suppl), S41. doi:10.1016/j.pdpdt.2019.101637. PMC7505481

28.) Shukla GS, Pero SC, Sun Y‑, Mei L, Zhang F, Sholler G, Krag DN (2019 Nov 16). Multiple antibodies targeting tumor‑specific mutations redirect immune cells to inhibit tumor growth and increase survival in experimental animal models. Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico, 22(7), 1094-1104. doi:10.1007/s12094-019-02235-3. PMC7586733

29.) Landesman WJ, Mulder K, Fredericks LP, Allan BF (2019 Nov 13). Cross-kingdom analysis of nymphal-stage Ixodes scapularis microbial communities in relation to Borrelia burgdorferi infection and load. FEMS Microbiology Ecology, 95(12), fiz167. doi:10.1093/femsec/fiz167. PMC6859517

30.) Ziegler CM, Dang L, Eisenhauer P, Kelly JA, King BR, Klaus JP, Manuelyan I, Mattice EB, Shirley DJ, Weir ME, Bruce EA, Ballif BA, Botten J (2019 Nov 11). NEDD4 family ubiquitin ligases associate with LCMV Z’s PPXY domain and are required for virus budding, but not via direct ubiquitination of Z. PLoS Pathogens, 15(11), e1008100. doi:10.1371/journal.ppat.1008100. PMC6874086

31.) Chia SB, Elko EA, Aboushousha R, Manuel AM, van de Wetering C, Druso JE, van der Velden J, Seward DJ, Anathy V, Irvin CG, Lam YW, van der Vliet A, Janssen-Heininger YM (2019 Nov 6). Dysregulation of the glutaredoxin/S-glutathionylation redox axis in lung diseases. American Journal of Physiology - Cell Physiology, 318(2), C304-C327. doi:10.1152/ajpcell.00410.2019. PMC7052607

32.) Nabi A, Yano J, Valentine MS, Picariello T, Van Houten JL (2019 Oct 29). SF-Assemblin genes in Paramecium: phylogeny and phenotypes of RNAi silencing on the ciliary-striated rootlets and surface organization. Cilia, 8(2), 2. doi:10.1186/s13630-019-0062-y. PMC6819543

33.) Borgmann-Winter B, Allen D (2019 Oct 14). How the Distance Between Drag-Cloth Checks Affects the Estimate of Adult and Nymphal Ixodes scapularis (Acari: Ixodidae) Density. Journal of Medical Entomology, 57(2), 623-626. doi:10.1093/jme/tjz179. PMC7317148

34.) Thompson AF, English EL, Nock AM, Willsey GG, Eckstrom K, Cairns B, Bavelock M, Tighe SW, Foote A, Shulman H, Pericleous A, Gupta S, Kadouri DE, Wargo MJ (2019 Oct 4). Characterizing species interactions that contribute to biofilm formation in a multispecies model of a potable water bacterial community. Microbiology, 166(1), 34-43. doi:10.1099/mic.0.000849. PMC7137775

35.) Collins C, Lui Y, Santos AM, Ballif BA, Gogerly-Moragoda AM, Brouwer H, Ross R, Balagurunathan K, Sharma S, Wright GJ, Davis S, Budd RC (2019 Sep 23). Detection of Cell Surface Ligands for Human Synovial γδ T Cells. The Journal of Immunology Author Choice, 203(9), 2369-2376. doi:10.4049/jimmunol.1900451. PMC6804759

36.) Lynch JB, Schwartzman JA, Bennett BD, McAnulty SJ, Knop M, Nyholm SV, Ruby EG (2019 Sep 20). Ambient pH Alters the Protein Content of Outer Membrane Vesicles, Driving Host Development in a Beneficial Symbiosis. Journal of Bacteriology, 201(20), e00319-19. doi:10.1128/JB.00319-19. PMC6755730

37.) Schwartzman JA, Lynch JB, Ramos SF, Zhou L, Apicella MA, Yew JY, Ruby EG (2019 Aug 27). Acidic pH promotes lipopolysaccharide modification and alters colonization in a bacteria-animal mutualism. Molecular microbiology, 112(4), 1326-1338. doi:10.1111/mmi.14365. PMC6823639

38.) St. Clair RM, Dumas CM, Williams KS, Goldstein MT, Stant EA, Ebert AM, Ballif BA (2019 Aug 16). PKC Induces Release of a Functional Ectodomain of the Guidance Cue Semaphorin6A. FEBS letters, 593(21), 3015-3028. doi:10.1002/1873-3468.13561. PMC6848763

39.) Dauerman HL, DeStephan CM, Taatjes Sommer H, Kurchena KC, DeSarno M, Mendoza EG, Henderson A, Schneider DJ (2019 Aug 13). Prolonged Clotting Time Among Patients Undergoing Transcatheter Aortic Valve Replacement. Journal of the American College of Cardiology, 74(6), 820-821. doi:10.1016/j.jacc.2019.06.022. PMC6713224

40.) Keller JI, Lima-Cordón R, Monroy MC, Schmoker AM, Zhang F, Howard A, Ballif BA, Stevens L (2019 Aug 8). Protein mass spectrometry detects multiple bloodmeals for enhanced Chagas disease vector ecology: Protein LC-MS/MS detects multiple bloodmeals. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, 74(6), 103998. doi:10.1016/j.meegid.2019.103998. PMC6763317

41.) Dash MB (2019 Jul 29). Infraslow coordination of slow wave activity through altered neuronal synchrony. Sleep, 42(12), zsz170. doi:10.1093/sleep/zsz170. PMC6930134

42.) Allen D, Borgmann–Winter B, Bashor L, Ward J (2019 Jul 24). The Density of the Lyme Disease Vector, Ixodes scapularis (Blacklegged Tick), Differs Between the Champlain Valley and Green Mountains, Vermont. Northeastern naturalist, 26(3), 545-560. doi:10.1656/045.026.0307. PMC6655441

43.) Preston JC, Powers B, Kostyun JL, Driscoll H, Zhang F, Zhong J (2019 Jul 18). Implications of region-specific gene expression for development of the partially fused petunia corolla. The Plant journal : for cell and molecular biology, 100(1), 158-175. doi:10.1111/tpj.14436. PMC6763366

44.) Faundez V, Wynne M, Crocker A, Tarquinio D (2019 Jul 17). Molecular Systems Biology of Neurodevelopmental Disorders, Rett Syndrome as an Archetype. Frontiers in Integrative Neuroscience, 13(1), 30. doi:10.3389/fnint.2019.00030. PMC6650571

45.) Willsey GG, Eckstrom K, LaBauve AE, Hinkel LA, Schutz K, Meagher RJ, LiPuma JJ, Wargo MJ (2019 Jul 10). Stenotrophomonas maltophilia Differential Gene Expression in Synthetic Cystic Fibrosis Sputum Reveals Shared and Cystic Fibrosis Strain-Specific Responses to the Sputum Environment. Journal of Bacteriology, 201(15), e00074-19. doi:10.1128/JB.00074-19. PMC6620408

46.) Riblet NB, Kenneally L, Shiner B, Watts BV (2019 Jun 28). Healthcare processes contributing to suicide risk in veterans during and after residential substance abuse treatment.. Journal of dual diagnosis, 15(4), 217-225. doi:10.1080/15504263.2019.1629053. PMC6868319

47.) Valentine MS, Yano J, Van Houten J (2019 Jun 14). A Novel Role for Polycystin-2 (Pkd2) in P. tetraurelia as a Probable Mg2+ Channel Necessary for Mg2+-Induced Behavior. Genes, 10(6), 455. doi:10.3390/genes10060455. PMC6627415

48.) Symes LB, Wershoven NL, Hoeger LO, Ralston JS, Martinson SJ, ter Hofstede HM, Palmer CM (2019 May 3). Applying and refining DNA analysis to determine the identity of plant material extracted from the digestive tracts of katydids. PeerJ, 7(6), e6808. doi:10.7717/peerj.6808. PMC6501762

49.) Scuderi RA, Ebenstein DB, Lam YW, Kraft J, Greenwood SL (2019 May). Inclusion of grape marc in dairy cattle rations alters the bovine milk proteome. The Journal of Dairy Research, 86(2), 154-161. doi:10.1017/S0022029919000372. PMC7033658

50.) Engel GL, Taber K, Vinton E, Crocker AJ (2019 Apr 16). Studying alcohol use disorder using Drosophila melanogaster in the era of ‘Big Data’. Behavioral and Brain Functions : BBF, 15(2), 7. doi:10.1186/s12993-019-0159-x. PMC6469124

51.) Corigliano MG, Albarracín RM, Vilas JM, Sánchez López EF, Bengoa Luoni SA, Deng B, Farran I, Veramendi J, Maiale SJ, Sander VA, Clemente M (2019 Apr 13). Heat treatment alleviates the growth and photosynthetic impairment of transplastomic plants expressing Leishmania infantum Hsp 83-Toxoplasma gondii SAG1 fusion protein. Plant science : an international journal of experimental plant biology, 284(2), 117-126. doi:10.1016/j.plantsci.2019.04.011. PMC6785835

52.) Moeller RW, Seehuus M (2019 Mar 29). Loneliness as a Mediator for College Students’ Social Skills and Experiences of Depression and Anxiety. Journal of adolescence, 73(2), 1-13. doi:10.1016/j.adolescence.2019.03.006. PMC6534439

53.) Mikheyeva IV, Thomas JM, Kolar SL, Corvaglia AR, Gaïa N, Leo S, Francois P, Liu GY, Rawat M, Cheung AL (2019 Feb 17). YpdA, a putative bacillithiol disulfide reductase, contributes to cellular redox homeostasis and virulence in Staphylococcus aureus. Molecular microbiology, 111(4), 1039-1056. doi:10.1111/mmi.14207. PMC6458089

54.) Carroll CM, Hsiang H, Snyder S, Forsberg J, Dash MB (2019 Feb 5). Cortical zeta-inhibitory peptide injection reduces local sleep need. Sleep, 42(5), zsz028. doi:10.1093/sleep/zsz028. PMC6941713

55.) Glenney B, O’Connor P (2019 Feb 5). Skateparks as hybrid elements of the city. Journal of urban design, 24(6), 840-855. doi:10.1080/13574809.2019.1568189. PMC6830735

56.) Zhang F, Ding L, Cui L, Barber R, Deng B (2019 Jan 31). Identification of long non-coding RNA-related and –coexpressed mRNA biomarkers for hepatocellular carcinoma. BMC Medical Genomics, 12(Suppl 1), 25. doi:10.1186/s12920-019-0472-0. PMC6357343

57.) Landesman WJ, Mulder K, Allan BF, Bashor LA, Keesing F, LoGiudice K, Ostfeld RS (2019 Jan 12). Potential effects of blood meal host on bacterial community composition in Ixodes scapularis nymphs. Ticks and tick-borne diseases, 10(3), 523-527. doi:10.1016/j.ttbdis.2019.01.002. PMC6441379

58.) DURST ME, TURCIOS A, LAURENCE C, MOSKOVITZ E (2019 Jan 10). Dispersion compensation by a liquid lens (DisCoBALL). Applied optics, 58(2), 428-435. doi:10.1364/AO.58.000428. PMC6342488

59.) Landesman WJ, Freedman ZB, Nelson DM (2019 Jan 9). Seasonal, sub-seasonal and diurnal variation of soil bacterial community composition in a temperate deciduous forest. FEMS Microbiology Ecology, 95(2), fiz002. doi:10.1093/femsec/fiz002. PMC6353803

60.) Yacawych WT, Palmer AL, Doczi MA (2019 Jan 4). Insulin Receptor Localization in the Embryonic Avian Hypothalamus. Neuroscience letters, 698(2), 126-132. doi:10.1016/j.neulet.2019.01.009. PMC6435403

61.) Ziegler CM, Eisenhauer P, Manuelyan I, Weir ME, Bruce EA, Ballif BA, Botten J (2018 Dec 9). Host-Driven Phosphorylation Appears to Regulate the Budding Activity of the Lassa Virus Matrix Protein. Pathogens, 7(4), 97. doi:10.3390/pathogens7040097. PMC6313517

62.) Hinkle KL, Olsen D (2018 Nov 15). Exposure to the lampricide TFM elicits an environmental stress response in yeast. FEMS Yeast Research, 19(1), foy121. doi:10.1093/femsyr/foy121. PMC6455944

63.) Tarr EA, Fidler BM, Gee KE, Anderson CM, Jager AK, Gallagher NM, Carroll KP, Fabian-Fine R (2018 Nov 8). Distribution of FMRFamide-related peptides and co-localization with glutamate in Cupiennius salei, an invertebrate model system. Cell and tissue research, 376(1), 83-96. doi:10.1007/s00441-018-2949-0. PMC6451683

64.) Glenney B, Mull S (2018 Sep 25). Skateboarding and the Ecology of Urban Space. Journal of sport and social issues, 42(6), 437-453. doi:10.1177/0193723518800525. PMC6269152

65.) Peng M, Cong K, Panzarino NJ, Nayak S, Calvo J, Deng B, Zhu LJ, Morocz M, Hegedus L, Haracska L, Cantor SB (2018 Sep 18). Opposing Roles of FANCJ and HLTF Protect Forks and Restrain Replication during Stress. Cell reports, 24(12), 3251-3261. doi:10.1016/j.celrep.2018.08.065. PMC6218949

66.) Bontemps-Gallo S, Gaviard C, Richards CL, Kentache T, Raffel SJ, Lawrence KA, Schindler JC, Lovelace J, Dulebohn DP, Cluss RG, Hardouin J, Gherardini FC (2018 Aug 31). Global Profiling of Lysine Acetylation in Borrelia burgdorferi B31 Reveals Its Role in Central Metabolism. Frontiers in Microbiology, 9(12), 2036. doi:10.3389/fmicb.2018.02036. PMC6127242

67.) Allen D, Dick CW, Strayer E, Perfecto I, Vandermeer J (2018 Aug 29). Scale and strength oak-mesophyte interactions in a transitional oak-hickory forest. Canadian journal of forest research. Journal canadien de la recherche forestiere, 48(11), 1366-1372. doi:10.1139/cjfr-2018-0131. PMC6261292

68.) Burgess EJ, Hoyt LR, Randall MJ, Mank MM, Bivona JJ III, Eisenhauer PL, Botten JW, Ballif BA, Lam YW, Wargo MJ, Boyson JE, Ather JL, Poynter ME (2018 Aug 29). Bacterial lipoproteins constitute the TLR2-stimulating activity of Serum Amyloid A. Journal of immunology (Baltimore, Md. : 1950), 201(8), 2377-2384. doi:10.4049/jimmunol.1800503. PMC6179936

69.) Keller JI, Schmidt JO, Schmoker AM, Ballif BA, Stevens L (2018 Aug 27). Protein mass spectrometry extends temporal blood meal detection over polymerase chain reaction in mouse-fed Chagas disease vectors. Memórias do Instituto Oswaldo Cruz, 113(10), e180160. doi:10.1590/0074-02760180160. PMC6167943

70.) Ong TW, Allen D, Vandermeer J (2018 Jul 24). Huffaker revisited: spatial heterogeneity and the coupling of ineffective agents in biological control. Ecosphere (Washington, D.C), 9(7), e02299. doi:10.1002/ecs2.2299. PMC6294135

71.) Krementsov DN, Asarian L, Fang Q, McGill MM, Teuscher C (2018 Jul 17). Sex-Specific Gene-by-Vitamin D Interactions Regulate Susceptibility to Central Nervous System Autoimmunity. Frontiers in Immunology, 9(7), 1622. doi:10.3389/fimmu.2018.01622. PMC6056725

72.) Wrenn SM, Griswold ED, Uhl FE, Uriarte JJ, Park HE, Coffey AL, Dearborn JS, Ahlers BA, Deng B, Lam YW, Huston DR, Lee PC, Wagner DE, Weiss DJ (2018 Jun 27). Avian lungs: A novel scaffold for lung bioengineering. PLoS ONE, 13(6), e0198956. doi:10.1371/journal.pone.0198956. PMC6021073

73.) Sladewski TE, Billington N, Ali MY, Bookwalter CS, Lu H, Krementsova EB, Schroer TA, Trybus KM (2018 Jun 26). Recruitment of two dyneins to an mRNA-dependent Bicaudal D transport complex. eLife, 7(6), e36306. doi:10.7554/eLife.36306. PMC6056235

74.) Loisel DA, Troyer RM, VandeWoude S (2018 Jun 22). High prevalence of Lynx rufus gammaherpesvirus 1 in wild Vermont bobcats. PeerJ, 6(6), e4982. doi:10.7717/peerj.4982. PMC6016526

75.) Schmoker AM, Driscoll HE, Geiger SR, Vincent JJ, Ebert AM, Ballif BA (2018 Jun 1). An in silico proteomics screen to predict and prioritize protein–protein interactions dependent on post-translationally modified motifs. Bioinformatics, 34(22), 3898-3906. doi:10.1093/bioinformatics/bty434. PMC6223376

76.) Yuan JT, Gatti DM, Philip VM, Kasparek S, Kreuzman AM, Mansky B, Sharif K, Taterra D, Taylor WM, Thomas M, Ward JO, Holmes A, Chesler EJ, Parker CC (2018 Apr 24). Genome-wide association for testis weight in the diversity outbred mouse population. Mammalian genome : official journal of the International Mammalian Genome Society, 29(5-6), 310-324. doi:10.1007/s00335-018-9745-8. PMC6396879

77.) Munson P, Lam YW, MacPherson M, Beuschel S, Shukla A (2018 Apr 16). Mouse serum exosomal proteomic signature in response to asbestos exposure. Journal of cellular biochemistry, 119(7), 6266-6273. doi:10.1002/jcb.26863. PMC6335961

78.) Munson P, Lam YW, Dragon J, MacPherson M, Shukla A (2018 Mar 19). Exosomes from asbestos-exposed cells modulate gene expression in mesothelial cells. The FASEB Journal, 32(8), 4328-4342. doi:10.1096/fj.201701291RR. PMC6044058

79.) English EL, Schutz KC, Willsey GG, Wargo MJ (2018 Mar 1). Transcriptional Responses of Pseudomonas aeruginosa to Potable Water and Freshwater. Applied and Environmental Microbiology, 84(6), e02350-17. doi:10.1128/AEM.02350-17. PMC5835727

80.) Graham E, Rymarchyk S, Wood M, Cen Y (2018 Feb 8). Development of Activity-Based Chemical Probes for Human Sirtuins. ACS chemical biology, 13(3), 782-792. doi:10.1021/acschembio.7b00754. PMC5889851

81.) Fairfield H, Falank C, Farrell M, Vary C, Boucher JM, Driscoll H, Liaw L, Rosen CJ, Reagan MR (2018 Jan 31). Development of a 3D Bone Marrow Adipose Tissue Model. Bone, 118(3), 77-88. doi:10.1016/j.bone.2018.01.023. PMC6062483

82.) Ziegler CM, Eisenhauer P, Kelly JA, Dang LN, Beganovic V, Bruce EA, King BR, Shirley DJ, Weir ME, Ballif BA, Botten J (2018 Jan 30). A Proteomics Survey of Junín Virus Interactions with Human Proteins Reveals Host Factors Required for Arenavirus Replication. Journal of Virology, 92(4), e01565-17. doi:10.1128/JVI.01565-17. PMC5790945

83.) Keller JI, Ballif BA, St. Clair RM, Vincent JJ, Monroy MC, Stevens L (2017 Dec 12). Chagas disease vector blood meal sources identified by protein mass spectrometry. PLoS ONE, 12(12), e0189647. doi:10.1371/journal.pone.0189647. PMC5726658

84.) Wood M, Rymarchyk S, Zheng S, Cen Y (2017 Dec 9). Trichostatin A Inhibits Deacetylation of Histone H3 and p53 by SIRT6. Archives of biochemistry and biophysics, 638(12), 8-17. doi:10.1016/j.abb.2017.12.009. PMC5762261

85.) Schmoker AM, Weinert JL, Kellett KJ, Johnson HE, Joy RM, Weir ME, Ebert AM, Ballif BA (2017 Nov 21). Dynamic multi-site phosphorylation by Fyn and Abl drives the interaction between CRKL and the novel scaffolding receptors DCBLD1 and DCBLD2. The Biochemical journal, 474(23), 3963-3984. doi:10.1042/BCJ20170615. PMC6029619

86.) St. Clair RM, Emerson SE, D’Elia KP, Weir ME, Schmoker AM, Ebert AM, Ballif BA (2017 Nov 17). Fyn-dependent phosphorylation of PlexinA1 and PlexinA2 at conserved tyrosines is essential for zebrafish eye development. The FEBS journal, 285(1), 72-86. doi:10.1111/febs.14313. PMC5760361

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167.) Galan JA, Geraghty KM, Lavoie G, Kanshin E, Tcherkezian J, Calabrese V, Jeschke GR, Turk BE, Ballif BA, Blenis J, Thibault P, Roux PP (2014 Jul 7). Phosphoproteomic analysis identifies the tumor suppressor PDCD4 as a RSK substrate negatively regulated by 14-3-3. Proceedings of the National Academy of Sciences of the United States of America, 111(29), E2918-E2927. doi:10.1073/pnas.1405601111. PMC4115529

168.) Bayir A, Brewer M (2014 Jun 12). Fragmentation of Bicyclic γ-Silyloxy-β-hydroxy-α-diazolactones as an Approach to Ynolides. The Journal of Organic Chemistry, 79(13), 6037-6046. doi:10.1021/jo500634d. PMC4084849

169.) Leung JM, Tran F, Pathak RB, Poupart S, Heaslip AT, Ballif BA, Westwood NJ, Ward GE (2014 Jun 3). Identification of T. gondii Myosin Light Chain-1 as a Direct Target of TachypleginA-2, a Small-Molecule Inhibitor of Parasite Motility and Invasion. PLoS ONE, 9(6), e98056. doi:10.1371/journal.pone.0098056. PMC4043638

170.) Rossman MJ, Nader S, Berry D, Orsini F, Klansky A, Haverkamp HC (2014 Jun). EFFECTS OF ALTERED AIRWAY FUNCTION ON EXERCISE VENTILATION IN ASTHMATIC ADULTS. Medicine and science in sports and exercise, 46(6), 1104-1113. doi:10.1249/MSS.0000000000000206. PMC4028423

171.) Rizzo AA, Suhanovsky MM, Baker ML, Fraser LC, Jones LM, Rempel DL, Gross ML, Chiu W, Alexandrescu AT, Teschke CM (2014 May 15). Multiple functional roles of the accessory I-domain of bacteriophage P22 coat protein revealed by NMR structure and cryoEM modeling. Structure (London, England : 1993), 22(6), 830-841. doi:10.1016/j.str.2014.04.003. PMC4068711

172.) Larson ER, Domozych DS, Tierney ML (2014 Apr 15). SNARE VTI13 plays a unique role in endosomal trafficking pathways associated with the vacuole and is essential for cell wall organization and root hair growth in arabidopsis. Annals of Botany, 114(6), 1147-1159. doi:10.1093/aob/mcu041. PMC4195547

173.) Doubleday PF, Ballif BA (2014 Apr 3). Developmentally-Dynamic Murine Brain Proteomes and Phosphoproteomes Revealed by Quantitative Proteomics. Proteomes, 2(2), 191-207. doi:10.3390/proteomes2020191. PMC4146493

174.) CHERIAN S, LAM YW, MCDANIELS I, STRUZIAK M, DELAY RJ (2014 Mar 27). ESTRADIOL RAPIDLY MODULATES ODOR RESPONSES IN MOUSE VOMERONASAL SENSORY NEURONS. Neuroscience, 269(2), 43-58. doi:10.1016/j.neuroscience.2014.03.011. PMC4270699

175.) Miller RW, Duncan AK, Schneebeli ST, Gray DL, Whalley AC (2014 Feb 24). Synthesis and Structural Data of Tetrabenzo[8]circulene. Chemistry (Weinheim an der Bergstrasse, Germany), 20(13), 3705-3711. doi:10.1002/chem.201304657. PMC4371848

176.) Angel SO, Figueras MJ, Alomar ML, Echeverria PC, Deng B (2014 Feb 21). Toxoplasma gondii Hsp90: potential roles in essential cellular processes of the parasite. Parasitology, 141(9), 1138-1147. doi:10.1017/S0031182014000055. PMC4181529

177.) Wagner DE, Bonenfant NR, Parsons C, Sokocevic D, Brooks EM, Borg ZD, Lathrop MJ, Wallis JD, Daly AB, Lam YW, Deng B, DeSarno MJ, Ashikaga T, Loi R, Weiss DJ (2014 Jan 22). Comparative Decellularization and Recellularization of Normal versus Emphysematous Human Lungs. Biomaterials, 35(10), 3281-3297. doi:10.1016/j.biomaterials.2013.12.103. PMC4215725

178.) Hristova M, Veith C, Habibovic A, Lam YW, Deng B, Geiszt M, Janssen-Heininger YM, van der Vliet A (2014 Jan 15). Identification of DUOX1-dependent redox signaling through protein S-glutathionylation in airway epithelial cells. Redox Biology, 2(10), 436-446. doi:10.1016/j.redox.2013.12.030. PMC3949091

179.) Wagner DE, Bonenfant NR, Sokocevic D, DeSarno M, Borg Z, Parsons C, Brooks EM, Platz J, Khalpey Z, Hoganson DM, Deng B, Lam YW, Oldinski RA, Ashikaga T, Weiss DJ (2014 Jan 8). Three-dimensional scaffolds of acellular human and porcine lungs for high throughput studies of lung disease and regeneration. Biomaterials, 35(9), 2664-2679. doi:10.1016/j.biomaterials.2013.11.078. PMC4215726

180.) Ufkin ML, Peterson S, Yang X, Driscoll H, Duarte C, Sathyanarayana P (2014 Jan 8). miR-125a regulates cell cycle, proliferation, and apoptosis by targeting the ErbB Pathway in Acute Myeloid Leukemia. Leukemia research, 38(3), 402-410. doi:10.1016/j.leukres.2013.12.021. PMC4117580

181.) Fetting JL, Guay JA, Karolak MJ, Iozzo RV, Adams DC, Maridas DE, Brown AC, Oxburgh L (2014 Jan 1). FOXD1 promotes nephron progenitor differentiation by repressing decorin in the embryonic kidney. Development (Cambridge, England), 141(1), 17-27. doi:10.1242/dev.089078. PMC3865747

182.) Long PM, Tighe SW, Driscoll HE, Moffett JR, Namboodiri AM, Viapiano MS, Lawler SE, Jaworski DM (2013 Nov 20). Acetate Supplementation Induces Growth Arrest of NG2/PDGFRα-Positive Oligodendroglioma-Derived Tumor-Initiating Cells. PLoS ONE, 8(11), e80714. doi:10.1371/journal.pone.0080714. PMC3835562

183.) Klaus JP, Eisenhauer P, Russo J, Mason AB, Do D, King B, Taatjes D, Cornillez-Ty C, Boyson JE, Thali M, Zheng C, Liao L, Yates JR III, Zhang B, Ballif BA, Botten JW (2013 Nov 13). The Intracellular Cargo Receptor ERGIC-53 Is Required for the Production of Infectious Arenavirus, Coronavirus, and Filovirus Particles. Cell Host & Microbe, 14(5), 522-534. doi:10.1016/j.chom.2013.10.010. PMC3999090

184.) Bercovici DA, Ogilvie JM, Tsvetkov N, Brewer M (2013 Nov 11). Intramolecular Polar [4⊕ + 2]-Cycloadditions of Aryl-1-aza-2-azoniaallene Salts: Unprecedented Reactivity Leading to Polycyclic Protonated Azomethine Imines. Angewandte Chemie (International ed. in English), 52(50), 13338-13341. doi:10.1002/anie.201306553. PMC4219620

185.) Potter RA, Bowser AM, Yang Y, Madalengoitia JS, Ziller JW (2013 Nov 8). Structure-Reactivity Relationships of Zwitterionic 1,3-diaza-Claisen Rearrangements. The Journal of organic chemistry, 78(23), 11772-11782. doi:10.1021/jo401810p. PMC4356197

186.) Jabre ND, Watanabe T, Brewer M (2013 Nov 6). Formal and total synthesis of (±)-cycloclavine. Tetrahedron letters, 56(1), 197-199. doi:10.1016/j.tetlet.2013.10.152. PMC3915717

187.) Suhanovsky MM, Teschke CM (2013 Oct 13). An Intramolecular Chaperone Inserted in Bacteriophage P22 Coat Protein Mediates Its Chaperonin-independent Folding. The Journal of Biological Chemistry, 288(47), 33772-33783. doi:10.1074/jbc.M113.515312. PMC3837121

188.) Tsen AR, Long PM, Driscoll HE, Davies MT, Teasdale BA, Penar PL, Pendlebury WW, Spees JL, Lawler SE, Viapiano MS, Jaworski DM (2013 Sep 30). Triacetin-based acetate supplementation as a chemotherapeutic adjuvant therapy in glioma. International journal of cancer. Journal international du cancer, 134(6), 1300-1310. doi:10.1002/ijc.28465. PMC3947395

189.) Case LK, Wall EH, Dragon JA, Saligrama N, Krementsov DN, Moussawi M, Zachary JF, Huber SA, Blankenhorn EP, Teuscher C (2013 Sep). The Y chromosome as a regulatory element shaping immune cell transcriptomes and susceptibility to autoimmune disease. Genome Research, 23(9), 1474-1485. doi:10.1101/gr.156703.113. PMC3759723

190.) Cheng X, Waters SP (2013 Aug 2). Pyridone Annulation via Tandem Curtius Rearrangement/6π-Electrocyclization: Total Synthesis of (−)-Lyconadin C. Organic letters, 15(16), 4226-4229. doi:10.1021/ol401954f. PMC3788595

191.) Aten TM, Redmond MM, Weaver SO, Love CC, Joy RM, Lapp AS, Rivera OD, Hinkle KL, Ballif BA (2013 Jun 13). Tyrosine Phosphorylation of the orphan receptor ESDN/DCBLD2 serves as a scaffold for the signaling adaptor CrkL. FEBS letters, 587(15), 2313-2318. doi:10.1016/j.febslet.2013.05.064. PMC3759512

192.) Fellows A, Deng B, Mierke D, Robey RB, Nichols RC (2013 Jun 5). Peptides modeled on the RGG domain of AUF1/hnRNP-D regulate 3′UTR-dependent gene expression. International immunopharmacology, 17(1), 132-141. doi:10.1016/j.intimp.2013.05.014. PMC3711235

193.) Zhao FQ (2013 Jun 1). OCTAMER-BINDING TRANSCRIPTION FACTORS: GENOMICS AND FUNCTIONS. Frontiers in bioscience (Landmark edition), 18(1), 1051-1071. doi:10.1016/j.intimp.2013.05.014. PMC3711235

194.) Zhang Z, Giampa GM, Draghici C, Huang Q, Brewer M (2013 Apr 15). Synthesis of demissidine by a ring fragmentation 1,3-dipolar cycloaddition approach. Organic letters, 15(9), 2100-2103. doi:10.1021/ol4004993. PMC3671602

195.) Ballif BA, Helias V, Peyrard T, Menanteau C, Saison C, Lucien N, Bourgouin S, Le Gall M, Cartron JP, Arnaud L (2013 Apr 15). Disruption of SMIM1 causes the Vel− blood type. EMBO Molecular Medicine, 5(5), 751-761. doi:10.1002/emmm.201302466. PMC3662317

196.) Serra AC, Warden PS, Fricker CR, Giese AR (2013 Apr 1). Distribution of Ticks and Prevalence of Borrelia burgdorferi in the Upper Connecticut River Valley of Vermont. Northeastern naturalist, 20(1), 197-204. doi:10.1656/045.020.0116. PMC4249684

197.) Syed K, Porollo A, Lam YW, Grimmett PE, Yadav JS (2013 Apr). CYP63A2, a Catalytically Versatile Fungal P450 Monooxygenase Capable of Oxidizing Higher-Molecular-Weight Polycyclic Aromatic Hydrocarbons, Alkylphenols, and Alkanes. Applied and Environmental Microbiology, 79(8), 2692-2702. doi:10.1128/AEM.03767-12. PMC3623170

198.) Krudysz-Amblo J, Jennings ME II, Knight T, Matthews DE, Mann KG, Butenas S (2013 Feb 20). Disulfide reduction abolishes tissue factor cofactor function. Biochimica et biophysica acta, 1830(6), 3489-3496. doi:10.1016/j.bbagen.2013.02.013. PMC3674504

199.) Sokocevic D, Bonenfant NR, Wagner DE, Borg ZD, Lathrop MJ, Lam YW, Deng B, DeSarno MJ, Ashikaga T, Loi R, Hoffman AM, Weiss DJ (2013 Feb 4). The effect of age and emphysematous and fibrotic injury on the re-cellularization of de-cellularized lungs. Biomaterials, 34(13), 3256-3269. doi:10.1016/j.biomaterials.2013.01.028. PMC4215729

200.) Bonenfant NR, Sokocevic D, Wagner DE, Borg ZD, Lathrop M, Lam YW, Deng B, DeSarno M, Ashikaga T, Loi R, Weiss DJ (2013 Feb 4). The Effects of Storage and Sterilization on De-Cellularized and Re-Cellularized Whole Lung. Biomaterials, 34(13), 3231-3245. doi:10.1016/j.biomaterials.2013.01.031. PMC4201372

201.) Kimble MO, Fleming K, Bennion KA (2013 Jan 17). Contributors to Hypervigilance in a Military and Civilian Sample. Journal of interpersonal violence, 28(8), 1672-1692. doi:10.1177/0886260512468319. PMC4157995

202.) Bior BK, Ballif BA (2012 Nov 21). Dab1 stabilizes its interaction with Cin85 by suppressing Cin85 phosphorylation at serine 587. FEBS letters, 587(1), 60-66. doi:10.1016/j.febslet.2012.10.051. PMC3532509

203.) Yano J, Rajendran A, Valentine MS, Saha M, Ballif BA, Van Houten JL (2012 Nov 10). Proteomic analysis of the cilia membrane of Paramecium tetraurelia. Journal of proteomics, 78(1), 113-122. doi:10.1016/j.jprot.2012.09.040. PMC3667161

204.) Jabre ND, Brewer M (2012 Oct 15). Stereoelectronic effects in the fragmentation of γ-silyloxy-β-hydroxy-α-diazocarbonyl compounds. The Journal of organic chemistry, 77(21), 9910-9914. doi:10.1021/jo301944t. PMC3489280

205.) Saha M, Carriere A, Cheerathodi M, Zhang X, Lavoie G, Rush J, Roux PP, Ballif BA (2012 Oct 1). RSK phosphorylates SOS1 creating 14-3-3 docking sites and negatively regulating MAPK activation. The Biochemical journal, 447(1), 159-166. doi:10.1042/BJ20120938. PMC4198020

206.) Previs MJ, Previs SB, Gulick J, Robbins J, Warshaw DM (2012 Aug 23). Molecular Mechanics of Cardiac Myosin Binding Protein-C in Native Thick Filaments . Science (New York, N.Y.), 337(6099), 1215-1218. doi:10.1126/science.1223602. PMC3561468

207.) Sheftic SR, Garcia PP, White E, Robinson VL, Gage DJ, Alexandrescu AT (2012 Aug 21). NMR Structure and Dynamics of the Response Regulator Sma0114 from Sinorhizobium meliloti. Biochemistry, 51(35), 6932-6941. doi:10.1021/bi300922z. PMC4346371

208.) Anjum R, Pae E, Blenis J, Ballif BA (2012 Aug 10). TPCK inhibits AGC kinases by direct activation loop adduction at phenylalanine-directed cysteine residues. FEBS letters, 586(19), 3471-3476. doi:10.1016/j.febslet.2012.07.075. PMC3606710

209.) Goswami T, Li X, Smith AM, Luderowski EM, Vincent JJ, Rush J, Ballif BA (2012 Jul). Comparative Phosphoproteomic Analysis of Neonatal and Adult Murine Brain. Proteomics, 12(13), 10.1002/pmic.201200003. doi:10.1002/pmic.201200003. PMC3816108

210.) Zhang A, Petrov KO, Hyun ER, Liu Z, Gerber SA, Myers LC (2012 Jul). The Tlo Proteins Are Stoichiometric Components of Candida albicans Mediator Anchored via the Med3 Subunit. Eukaryotic Cell, 11(7), 874-884. doi:10.1128/EC.00095-12. PMC3416505

211.) Sathyanarayana P, Dev A, Pradeep A, Ufkin M, Licht JD, Wojchowski DM (2012 Jun 7). Spry1 as a novel regulator of erythropoiesis, EPO/EPOR target, and suppressor of JAK2. Blood, 119(23), 5522-5531. doi:10.1182/blood-2011-11-392571. PMC3369686

212.) Bentley PA, Shao Y, Misra Y, Morielli AD, Zhao FQ (2012 Mar). Characterization of Bovine Glucose Transporter 1 Kinetics and Substrate Specificities in Xenopus Oocytes. Journal of dairy science, 95(3), 1188-1197. doi:10.3168/jds.2011-4430. PMC4337999

213.) Saison C, Peyrard T, Landre C, Ballif BA, Schlosser KA, Dettori I, Chicheportiche C, Nemeth P, Cartron JP, Arnaud L (2012 Feb 20). A new AQP1 null allele identified in a Gypsy woman who developed an anti-CO3 during her first pregnancy. Vox sanguinis, 103(2), 137-144. doi:10.1111/j.1423-0410.2012.01590.x. PMC4201376

214.) Helias V, Saison C, Ballif BA, Peyrard T, Takahashi J, Takahashi H, Tanaka M, Deybach JC, Puy H, Le Gall M, Sureau C, Pham BN, Le Pennec PY, Tani Y, Cartron JP, Arnaud L (2012 Jan 15). The human porphyrin transporter ABCB6 is dispensable for erythropoiesis but responsible for the new blood group system Langereis. Nature genetics, 44(2), 170-173. doi:10.1038/ng.1069. PMC3664204

215.) Saison C, Helias V, Ballif BA, Peyrard T, Puy H, Miyazaki T, Perrot S, Vayssier-Taussat M, Waldner M, Pennec PY, Cartron JP, Arnaud L (2012 Jan 15). Null alleles of ABCG2 encoding the breast cancer resistance protein define the new blood group system Junior. Nature genetics, 44(2), 174-177. doi:10.1038/ng.1070. PMC3653631

216.) Wall EH, McFadden TB (2011 Dec 28). A local affair: how the mammary gland adapts to changes in milking frequency. Journal of animal science, 90(5), 1695-1707. doi:10.2527/jas.2011-4790. PMC4354877

217.) Gotelli NJ, Smith AM, Ellison AM, Ballif BA (2011 May 2). Proteomic Characterization of the Major Arthropod Associates of the Carnivorous Pitcher Plant Sarracenia purpurea. Proteomics, 11(11), 2354-2358. doi:10.1002/pmic.201000256. PMC3517077

218.) Sheftic SR, Garcia PP, Robinson VL, Gage DJ, Alexandrescu AT (2010 Oct 10). NMR assignments for the Sinorhizobium meliloti response regulator Sma0114. Biomolecular NMR assignments, 5(1), 55-58. doi:10.1007/s12104-010-9266-1. PMC4343204

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